MirGeneDB 3.0

23 microRNA genes with node of origin G. morhua
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Gmo-Mir-430-o34 None MIR-430 AAGUGCU None None contig662347 449 509 - G. morhua Vertebrata No 1 1
Gmo-Mir-11183 gmo-mir-11183 MIR-11183 CCCAGGU MIMAT0044169 MIMAT0044170 GeneScaffold_2047 90781 90832 + G. morhua G. morhua No 1
Gmo-Mir-11187 gmo-mir-11187 MIR-11187 CGUCAUA MIMAT0044345 MIMAT0044346 contig124093 929 988 - G. morhua G. morhua No 1
Gmo-Mir-11217 gmo-mir-11217 MIR-11217 UGGCCUG MIMAT0044385 None GeneScaffold_1351 44808 44863 + G. morhua G. morhua No 1
Gmo-Mir-11223 gmo-mir-11223 MIR-11223 AUAGUCU MIMAT0044392 MIMAT0044393 GeneScaffold_1549 79250 79310 - G. morhua G. morhua No
Gmo-Mir-11228 gmo-mir-11228 MIR-11228 CAGGUGU None MIMAT0044398 GeneScaffold_1681 554811 554863 - G. morhua G. morhua No
Gmo-Mir-11230 gmo-mir-11230 MIR-11230 AAACCGC MIMAT0044400 None GeneScaffold_1770 375102 375158 + G. morhua G. morhua No 1
Gmo-Mir-11236 gmo-mir-11236 MIR-11236 CUCCCAU MIMAT0044408 MIMAT0044409 GeneScaffold_2112 201224 201287 - G. morhua G. morhua No 1
Gmo-Mir-11272 gmo-mir-11272 MIR-11272 ACACUUG MIMAT0044457 MIMAT0044458 GeneScaffold_4591 103263 103329 - G. morhua G. morhua No 1 1
Gmo-Mir-11275 gmo-mir-11275 MIR-11275 CAGCCCC MIMAT0044461 None GeneScaffold_505 10027 10083 + G. morhua G. morhua No 1
Gmo-Mir-11278 gmo-mir-11278 MIR-11278 GGGAGAA MIMAT0044464 None GeneScaffold_568 33666 33727 + G. morhua G. morhua No 1
Gmo-Mir-11935 gmo-mir-11935 MIR-11935 CUCCAGA MIMAT0046069 MIMAT0046070 GeneScaffold_3477 17415 17475 + G. morhua G. morhua No
Gmo-Mir-11937 gmo-mir-11937 MIR-11937 GAAGACC MIMAT0046073 MIMAT0046074 GeneScaffold_1180 179573 179639 - G. morhua G. morhua No 1
Gmo-Novel-1 None GMO-NOVEL-1 UAAGCUG None None contig91536 409 467 - G. morhua G. morhua No
Gmo-Novel-2 None GMO-NOVEL-2 GCACUGC None None GeneScaffold_3708 172174 172231 - G. morhua G. morhua No
Gmo-Novel-3 None GMO-NOVEL-3 UUUGUCU None None GeneScaffold_1774 14608 14671 - G. morhua G. morhua No
Gmo-Novel-4 None GMO-NOVEL-4 AGAGUUU None None GeneScaffold_1503 33136 33193 - G. morhua G. morhua No
Gmo-Novel-5 None GMO-NOVEL-5 AGGACAU None None contig186083 219 281 - G. morhua G. morhua No 1
Gmo-Novel-6 None GMO-NOVEL-6 UACCACG None None GeneScaffold_1180 71067 71126 - G. morhua G. morhua No 1 1
Gmo-Novel-7 None GMO-NOVEL-7 ACUGAAC None None GeneScaffold_125 173638 173702 - G. morhua G. morhua No 1
Gmo-Novel-8 None GMO-NOVEL-8 GUGCAGA None None GeneScaffold_1263 123004 123059 + G. morhua G. morhua No
Gmo-Novel-9 None GMO-NOVEL-9 AGAAUUC None None GeneScaffold_2326 272579 272640 + G. morhua G. morhua No
Gmo-Novel-10 None GMO-NOVEL-10 CCAUGUG None None GeneScaffold_4339 27172 27228 + G. morhua G. morhua No

(red - mature/co-mature, blue - star)

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