| MirGeneDB ID | Aae-Mir-988 |
| Family name |
MIR-988 (all species) |
| Species |
Yellow fever mosquito (Aedes aegypti) |
| MiRBase ID |
aae-mir-988
|
| Paralogues |
|
| Orthologues |
Aga-Mir-988
Dan-Mir-988
Dme-Mir-988
Dmo-Mir-988
Dsi-Mir-988
Dya-Mir-988
Gpa-Mir-988
Hme-Mir-988
|
| Node of Origin (locus) |
Panorpida
|
| Node of Origin (family) |
Panorpida
|
Genome context (Aaeg_L3) |
supercont1.442: 623057-623115 [-]
Ensembl
|
| Seed |
CCCUUGU |
Precursor (pre-Mir +30nt flank) |
CGACAGGUUUGAUGGAAACCUGCUGCGGGUGUGUGCUUUGUGACAAUGAGAUUCGGUUCGAUAUCAUCCCCUUGUUGCAAACCUCACGCUUGCGGUAGGUUCCACAACUGCUGAGAGGU
Get precursor sequence
|
| Structure | 10 20 30 40 50
CGACAGGUUUGAUGGAA--| UGC UG UGA UCGGUU
ACCUGCUGCGGGUGUG UUUG ACAA GAU \
UGGAUGGCGUUCGCAC AAAC UGUU CUA C
UGGAGAGUCGUCAACACCU^ UCC GU CCC CUAUAG
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
| Star sequence |
Aae-Mir-988_5p* |
| mirBase accession | MIMAT0014280 |
| Sequence |
0- GUGUGCUUUGUGACAAUGAGAU -22
Get sequence
|
| Mature sequence |
Aae-Mir-988_3p |
| mirBase accession | MIMAT0014281 |
| Sequence |
37- CCCCUUGUUGCAAACCUCACGC -59
Get sequence
|