| MirGeneDB ID | Aca-Mir-9573 |
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| Family name |
MIR-9573 (all species) |
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| Species |
Green anole lizard (Anolis carolinensis) |
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| MiRBase ID |
aca-mir-9573
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. carolinensis
|
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| Node of Origin (family) |
A. carolinensis
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Genome context
(anoCar2) |
3: 176359718-176359772 [-]
UCSC
Ensembl
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| Seed |
CAAAACU |
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Precursor
(pre-Mir +30nt flank) |
GCCUAUAUGUAAAAACUGAAAUAAAGUGACAUGGACAAUUUUGGUUUUGAUGUUUAAUGAGUAUCAAAACUAGGAUUGUCUAUGCCAUUGUGUUUCCUUUAACUCCAGUUUUUCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCCUAUAUGUAAAAACU--| A A UUUA
GAAAUA AGUG CAUGGACAAUUUUGGUUUUGAUG \
CUUUGU UUAC GUAUCUGUUAGGAUCAAAACUAU A
ACUUUUUGACCUCAAUUUC^ G C GAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
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| Star sequence |
Aca-Mir-9573_5p* |
| mirBase accession | MIMAT0037578 |
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| Sequence |
0- AUGGACAAUUUUGGUUUUGAUG -22
Get sequence
|
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| Mature sequence |
Aca-Mir-9573_3p |
| mirBase accession | MIMAT0037579 |
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| Sequence |
33- UCAAAACUAGGAUUGUCUAUGC -55
Get sequence
|
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