MirGeneDB 3.0

20 microRNA genes with node of origin A. carolinensis
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Aca-Mir-1677-o1 aca-mir-1677a MIR-1677 GACUUCA None MIMAT0021796 5 15152952 15153008 + A. carolinensis Diapsida Unknown
Aca-Mir-5396-P1 aca-mir-5396a MIR-5396 CGCACAA MIMAT0022003 None 1 69318558 69318617 + A. carolinensis A. carolinensis No 1
Aca-Mir-5396-P2 aca-mir-5396b MIR-5396 CACACAA MIMAT0037580 MIMAT0037581 1 213792664 213792723 - A. carolinensis A. carolinensis No 1
Aca-Mir-5397 aca-mir-5397 MIR-5397 ACGCAGA MIMAT0022004 MIMAT0022005 2 92804660 92804720 + A. carolinensis A. carolinensis No 1
Aca-Mir-5399 aca-mir-5399 MIR-5399 UGCAAGA MIMAT0022008 MIMAT0022009 3 25386690 25386749 - A. carolinensis A. carolinensis No 1
Aca-Mir-5402 aca-mir-5402 MIR-5402 CUUCUCU MIMAT0022012 MIMAT0022013 GL343894.1 87890 87947 + A. carolinensis A. carolinensis No
Aca-Mir-5405 aca-mir-5405 MIR-5405 GUUUUAU MIMAT0022018 MIMAT0022019 GL343207.1 3269097 3269153 + A. carolinensis A. carolinensis No 1
Aca-Mir-5406 aca-mir-5406 MIR-5406 UUUAGAC MIMAT0022020 MIMAT0022021 GL343282.1 1474914 1474970 - A. carolinensis A. carolinensis No 1
Aca-Mir-5407 aca-mir-5407 MIR-5407 UUCGGAU MIMAT0022022 MIMAT0022023 GL343282.1 1475314 1475373 - A. carolinensis A. carolinensis No 1
Aca-Mir-5408 aca-mir-5408a MIR-5408 UAUCUCC MIMAT0022024 MIMAT0022025 GL343282.1 1472528 1472585 - A. carolinensis A. carolinensis No 1
Aca-Mir-5412 aca-mir-5412 MIR-5412 AGGGUCC MIMAT0022030 MIMAT0022031 GL343214.1 285133 285189 - A. carolinensis A. carolinensis No 1
Aca-Mir-5417 aca-mir-5417 MIR-5417 CAUCCCA None MIMAT0022037 GL343364.1 1077044 1077099 - A. carolinensis A. carolinensis No 1
Aca-Mir-5426 aca-mir-5426 MIR-5426 ACUCUAA MIMAT0022046 MIMAT0022047 3 195203204 195203265 + A. carolinensis A. carolinensis No 1
Aca-Mir-5435 aca-mir-5435b MIR-5435 AUGACCU MIMAT0022090 MIMAT0022090 2 25825607 25825663 + A. carolinensis A. carolinensis No
Aca-Mir-5436 aca-mir-5436 MIR-5436 GCUCGCU MIMAT0022057 MIMAT0022058 4 151844946 151845004 + A. carolinensis A. carolinensis No 1
Aca-Mir-5452 aca-mir-5452 MIR-5452 GGCCCUC MIMAT0022075 MIMAT0022076 GL343282.1 1468406 1468464 + A. carolinensis A. carolinensis No
Aca-Mir-9572 aca-mir-9572 MIR-9572 ACAGCCU MIMAT0037576 MIMAT0037577 GL343262.1 1379996 1380056 - A. carolinensis A. carolinensis No 1 1
Aca-Mir-9573 aca-mir-9573 MIR-9573 CAAAACU MIMAT0037578 MIMAT0037579 3 176359718 176359772 - A. carolinensis A. carolinensis No 1 1
Aca-Mir-9574 aca-mir-9574 MIR-9574 UUCAUCU MIMAT0037582 MIMAT0037583 2 141270233 141270287 + A. carolinensis A. carolinensis No
Aca-Mir-9576 aca-mir-9576 MIR-9576 UUUUAUA MIMAT0037586 MIMAT0037587 GL343418.1 621266 621323 - A. carolinensis A. carolinensis No 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all