| MirGeneDB ID | Aca-Mir-9576 |
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| Family name |
MIR-9576 (all species) |
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| Species |
Green anole lizard (Anolis carolinensis) |
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| MiRBase ID |
aca-mir-9576
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. carolinensis
|
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| Node of Origin (family) |
A. carolinensis
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Genome context
(anoCar2) |
GL343418.1: 621266-621323 [-]
UCSC
Ensembl
|
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| Seed |
UUUUAUA |
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Precursor
(pre-Mir +30nt flank) |
UUUCUAUGAAUAGAUGCCAUCCCAGGUUCCUUCUACACUGCCAUAUAAUCCAGAUUAUCUGUUUUGAUUUUAUAUGGCAAUGUAGAGGAAGGUUUCUUUUCCCACCACGACCCCUUUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUUCUAUGAAUAGAUGCCAUC-----| AGG U C UCCAGAUUAU
CC UUCCU CUACA UGCCAUAUAA \
GG AAGGA GAUGU ACGGUAUAUU C
CUUUCCCCAGCACCACCCUUUUCUUU^ --- - A UUAGUUUUGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Aca-Mir-9576_5p* |
| mirBase accession | MIMAT0037586 |
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| Sequence |
0- UUCUACACUGCCAUAUAAUCCA -22
Get sequence
|
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| Mature sequence |
Aca-Mir-9576_3p |
| mirBase accession | MIMAT0037587 |
|---|
| Sequence |
36- AUUUUAUAUGGCAAUGUAGAGG -58
Get sequence
|
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