| MirGeneDB ID | Ami-Mir-7463 |
|---|
| Family name |
MIR-7463 (all species) |
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| Species |
American alligator (Alligator mississippiensis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Cli-Mir-7463
Cpi-Mir-7463
Gga-Mir-7463
Spt-Mir-7463
Tgu-Mir-7463
|
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| Node of Origin (locus) |
Diapsida
|
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| Node of Origin (family) |
Diapsida
|
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Genome context
(GCF_000281125.3_ASM28112v4_AMI_add) |
NW_017713592.1: 5259115-5259176 [+]
UCSC
|
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| Seed |
UUACUUU |
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Precursor
(pre-Mir +30nt flank) |
UAUUACCAUGUUAUUAUGGAUAGUAUAGACUGAGUCUCCUUGAAAGUAAUGGCAUGUGAUUGCUUACCCCAUUACUUUCAAUGGGACUAAGUCUAUGUCAUCCUUAGGGACUCAAUCCCAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UAUUACCAUGUUAUUAU--| AG G C CAUGUGA
GGAU UAUAGACU AGUCUC UUGAAAGUAAUGG U
CCUA GUAUCUGA UCAGGG AACUUUCAUUACC U
UUACCCUAACUCAGGGAUU^ CU A U CCAUUCG
120 110 100 90 80 70 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Star sequence |
Ami-Mir-7463_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UGAGUCUCCUUGAAAGUAAUGG -22
Get sequence
|
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| Mature sequence |
Ami-Mir-7463_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
40- AUUACUUUCAAUGGGACUAAGU -62
Get sequence
|
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