| MirGeneDB ID | Spt-Mir-7463 |
|---|---|
| Family name | MIR-7463 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Ami-Mir-7463 Cli-Mir-7463 Cpi-Mir-7463 Gga-Mir-7463 Tgu-Mir-7463 |
| Node of Origin (locus) | Diapsida |
| Node of Origin (family) | Diapsida |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01005361.1: 1727542-1727603 [+] UCSC Ensembl |
| Seed | GAGUCUC |
| Precursor (pre-Mir +30nt flank) |
UAUUACCAUGUUAUUAUGGAUAGUAUAGAGUGAGUCUCCUUGAAAGUAAUGGCAUGUGAUUGCUUACCCCAUUACUUUCAAUUGGACUAAGUCUAUGUCAUCCUUAGGGACUCAAUCCCAUUGet precursor sequence |
| Structure | 10 20 30 40 50 60 UAUUACCAUGUUAUUAU--| AG GUG CC CAUGUGA GGAU UAUAGA AGUCU UUGAAAGUAAUGG U CCUA GUAUCU UCAGG AACUUUCAUUACC U UUACCCUAACUCAGGGAUU^ CU GAA UU CCAUUCG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Mature sequence | Spt-Mir-7463_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGAGUCUCCUUGAAAGUAAUGG -22
Get sequence
|
| Star sequence | Spt-Mir-7463_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- AUUACUUUCAAUUGGACUAAGU -62
Get sequence
|
