| MirGeneDB ID | Bfl-Mir-129-P7 |
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| Family name |
MIR-129 (all species) |
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| Species |
Florida lancelet (Branchiostoma floridae) |
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| MiRBase ID |
bfl-mir-129a
|
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| Paralogues |
Bfl-Mir-129-P8
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| Orthologues |
Bla-Mir-129-P7
|
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| Node of Origin (locus) |
Branchiostoma
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| Node of Origin (family) |
Chordata
|
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Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic) |
NC_049982.1: 9566952-9567011 [+]
UCSC
|
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| Seed |
CUUUUUG |
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Precursor
(pre-Mir +30nt flank) |
GCUGUGUGCAUCUCUCCCGGCGUGCCCUCUCCUUUUUGUGGUUUGGGGCUUUUGAGAUGAUGACAGAAAAGCCCUUACCUCAAAAGGGAUAGGGUUCUGCUGCAUGUAGCGACAUAUACG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCUGUGUGCAUCUCUCC- U-| C U UU GAGAUG
CGGCG GCCCU UCCUUUUUG GGU GGGGCUUUU \
GUCGU UGGGA AGGGAAAAC CCA UCCCGAAAA A
GCAUAUACAGCGAUGUAC CU^ U U U- GACAGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Bfl-Mir-129-P7_5p |
| mirBase accession | MIMAT0010008 |
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| Sequence |
0- CCUUUUUGUGGUUUGGGGCUUUU -23
Get sequence
|
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| Star sequence |
Bfl-Mir-129-P7_3p* (predicted) |
| mirBase accession | MIMAT0010009 |
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| Sequence |
38- AAGCCCUUACCUCAAAAGGGAU -60
Get sequence
|
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