| MirGeneDB ID | Bfl-Mir-129-P8 |
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| Family name |
MIR-129 (all species) |
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| Species |
Florida lancelet (Branchiostoma floridae) |
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| MiRBase ID |
bfl-mir-129b
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| Paralogues |
Bfl-Mir-129-P7
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| Orthologues |
Bla-Mir-129-P8a
Bla-Mir-129-P8b
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| Node of Origin (locus) |
Branchiostoma
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| Node of Origin (family) |
Chordata
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Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic) |
NC_049992.1: 13848286-13848343 [-]
UCSC
|
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| Seed |
CCUUCUG |
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Precursor
(pre-Mir +30nt flank) |
ACUUCGCCGACUGUACCUACCAUGAUGGAUACCUUCUGUGGUUUGGGCGAUCGUGUGGUUGAGACGAAGCCCUUACCCCAAAAGGUGUCUGUCAUGGUAAGCUUCAACUGCCGUAAGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACUUCGCCGACUGUACC--| C U UU GA UGUGG
UACCAUGAUGGAUACCUU UG GGU GGGC UCG \
AUGGUACUGUCUGUGGAA AC CCA CCCG AGC U
AGAAUGCCGUCAACUUCGA^ A C UU A- AGAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Mature sequence |
Bfl-Mir-129-P8_5p |
| mirBase accession | MIMAT0020080 |
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| Sequence |
0- ACCUUCUGUGGUUUGGGCGAUCG -23
Get sequence
|
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| Star sequence |
Bfl-Mir-129-P8_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
36- AAGCCCUUACCCCAAAAGGUGU -58
Get sequence
|
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