MirGeneDB 3.0
MirGeneDB ID

Bko-Mir-12594

Family name MIR-12594 (all species)
Species Monogonont Rotifer 2 (Brachionus koreanus)
MiRBase ID
Paralogues
Orthologues Ava-Mir-12594-P1  Ava-Mir-12594-P2  Bpl-Mir-12594  Sne-Mir-12594 
Node of Origin (locus) Rotifera
Node of Origin (family) Rotifera
Genome context
(Brachionus_koreanusGCA_016987375.1_Bk_v0.5.4_genomic)		 PJRA01000412.1: 1986186-1986255 [-] Ensembl
Seed UAUCAGU
Precursor
(pre-Mir +30nt flank)		 
AGAAAUAUGAUUCAAUACUGAGACUUGUUCCAGUGGUACAGCGCUGAUUAACAGUUGUAAUAUGCUAACAAGUUUCUGUAUCAGUAGCUCUACUACUGAAACAAGCUCAGUUCUGCUCAUCCUAUCUGCA
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Structure
        10           20        30        40         50        60     
AGAAAUAUGAUUCAAUA---|    A      C        C   -      UA    UUGUAAUAUG 
                    CUGAG CUUGUU CAGUGGUA AGC GCUGAU  ACAG          \
                    GACUC GAACAA GUCAUCAU UCG UGACUA  UGUC          C
ACGUCUAUCCUACUCGUCUU^    -      A        C   A      --    UUUGAACAAU 
.       120       110        100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Bko-Mir-12594_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAGUGGUACAGCGCUGAUUAACAG -24
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Mature sequence

Bko-Mir-12594_3p
mirBase accessionNone
Sequence 
47- GUAUCAGUAGCUCUACUACUGAA -70
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