| MirGeneDB ID | Bla-Mir-4861 |
|---|
| Family name |
MIR-4861 (all species) |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bfl-Mir-4861
|
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
|
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Genome context
(BraLan2) |
Sc0000005: 3994287-3994346 [+]
Ensembl
|
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| Seed |
UUUACGU |
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Precursor
(pre-Mir +30nt flank) |
CGGAACAGUUGGAUCUGCUCACAGACGAUGAGCCAAUGCGGCAUGUAAAAGGCUGAACUGUUCUGUGUCUUUACGUGCCACAUUGUCUCCUUGUCUGCUGUGCUUAAGCAUCGAAGGACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGGAACAGUUGGAUCUG- U -| U C C A UGAACU
C CA CAGACGA GAG CAAUG GGCAUGUAAA GGC \
G GU GUCUGUU CUC GUUAC CCGUGCAUUU CUG G
UCAGGAAGCUACGAAUUC U C^ C U A - UGUCUU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Bla-Mir-4861_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCCAAUGCGGCAUGUAAAAGGC -23
Get sequence
|
|---|
| Mature sequence |
Bla-Mir-4861_3p |
| mirBase accession | None |
|---|
| Sequence |
38- CUUUACGUGCCACAUUGUCUCC -60
Get sequence
|
|---|
