| MirGeneDB ID | Bpl-Mir-12595-P2 |
|---|
| Family name |
MIR-12595 (all species) |
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| Species |
Monogonont Rotifer 1 (Brachionus plicatilis) |
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| MiRBase ID |
|
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| Paralogues |
Bpl-Mir-12595-P1
|
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| Orthologues |
Ava-Mir-12595-P2
Bko-Mir-12595-P2
Sne-Mir-12595
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| Node of Origin (locus) |
Brachionus
|
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| Node of Origin (family) |
Rotifera
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Genome context
(Bpl_ASM1027981) |
QEOQ01000433.1: 273783-273841 [-]
Ensembl
|
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| Seed |
AUCUGAC |
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Precursor
(pre-Mir +30nt flank) |
UUUGGAGAAAAAGAAAUUUCGAAUAGUAGUUCGUGGCUCCUGGCAAGAAAAGGUAGUCUUAAUUUCCUAUCUGACAGGUAGCCAUGUUUUACUGUUGAUAACUUACAGCAUUUAUCGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUGGAGAAAAAGAAAUU---| G UU - GCA AA UAGUC
UC AAUAGUAG CGUGGCU CCUG AGA AGG U
AG UUGUCAUU GUACCGA GGAC UCU UCC U
UCGCUAUUUACGACAUUCAAU^ - UU U AG- A- UUUAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Bpl-Mir-12595-P2_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UCGUGGCUCCUGGCAAGAAAAGG -23
Get sequence
|
|---|
| Mature sequence |
Bpl-Mir-12595-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UAUCUGACAGGUAGCCAUGUUU -59
Get sequence
|
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