MirGeneDB 3.0

16 microRNA genes with node of origin Brachionus
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Bko-Mir-1-P22 None MIR-1 GGAAUGU None None PJRA01000444.1 1523881 1523940 - Brachionus Bilateria No 1
Bpl-Mir-1-P22 None MIR-1 GGAAUGU None None QEOQ01000226.1 1075395 1075454 - Brachionus Bilateria No 1
Bpl-Mir-1-P23 None MIR-1 GGAAUGU None None QEOQ01000508.1 2616878 2616960 + Brachionus Bilateria No 1
Bpl-Mir-36-P16 None MIR-36 CACCGGG None None QEOQ01000180.1 141578 141633 - Brachionus Protostomia No
Bpl-Mir-36-P18 None MIR-36 CACCGGG None None QEOQ01000180.1 141350 141410 - Brachionus Protostomia No
Bko-Mir-87-o7 None MIR-87 UGAGCAA None None PJRA01000263.1 5959829 5959907 - Brachionus Protostomia No 1
Bpl-Mir-87-o7 None MIR-87 UGAGCAA None None QEOQ01000573.1 507118 507197 + Brachionus Protostomia No 1
Bko-Mir-12595-P1 None MIR-12595 AUCUGAC None None PJRA01000198.1 741472 741539 - Brachionus Rotifera No 1
Bpl-Mir-12595-P1 None MIR-12595 AUCUGAC None None QEOQ01000487.1 32950 33015 - Brachionus Rotifera No 1
Bko-Mir-12595-P2 None MIR-12595 AUCUGAC None None PJRA01000257.1 2384 2444 + Brachionus Rotifera No
Bpl-Mir-12595-P2 None MIR-12595 AUCUGAC None None QEOQ01000433.1 273783 273841 - Brachionus Rotifera No 1
Bko-Mir-12600 None MIR-12600 GACUAGG None None PJRA01000160.1 1160233 1160293 - Brachionus Brachionus No
Bpl-Mir-12600 None MIR-12600 GACUAGG None None QEOQ01000041.1 165073 165130 + Brachionus Brachionus Unknown
Bpl-Mir-12601 None MIR-12601 AGGCCAU None None QEOQ01000590.1 664374 664431 - Brachionus Brachionus Unknown 1
Bko-Mir-12602 None MIR-12602 UUCACAA None None PJRA01000313.1 1985619 1985679 - Brachionus Brachionus No 1
Bpl-Mir-12602 None MIR-12602 UUCACAA None None QEOQ01000303.1 258833 258893 - Brachionus Brachionus No 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all