MirGeneDB 3.0
MirGeneDB ID

Bpl-Mir-12600

Family name MIR-12600 (all species)
Species Monogonont Rotifer 1 (Brachionus plicatilis)
MiRBase ID
Paralogues
Orthologues Bko-Mir-12600 
Node of Origin (locus) Brachionus
Node of Origin (family) Brachionus
Genome context
(Bpl_ASM1027981)		 QEOQ01000041.1: 165073-165130 [+] Ensembl
Seed GACUAGG
Precursor
(pre-Mir +30nt flank)		 
CUUUUGUUUCUGGAUUUAAAGCAAUCUGCGUGCCAGACUGUUCUUAGUUACGCUAGAUUAGAAUGCUGACUAGGUCGGAUUUGGUAAUAAUCCGGGUCUGUUGAAUUUCAAUUUUUUU
Get precursor sequence
Structure
        10        20         30             40        50         
CUUUUGUUUCUGGAUUUAAAG  -     CG----       -|  UU        C  UAGAU 
                     CA AUCUG      UGCCAGA CUG  CUUAGUUA GC     \
                     GU UGGGC      AUGGUUU GGC  GGAUCAGU CG     U
UUUUUUUAACUUUAAGUU---  C     CUAAUA       A^  U-        -  UAAGA 
      110          100        90        80         70         60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Star sequence

Bpl-Mir-12600_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGCCAGACUGUUCUUAGUUACGCU -24
Get sequence
Mature sequence

Bpl-Mir-12600_3p (predicted)
mirBase accessionNone
Sequence 
36- UGACUAGGUCGGAUUUGGUAAU -58
Get sequence