| MirGeneDB ID | Bta-Mir-149 |
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| Family name |
MIR-149 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-149
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| Paralogues |
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| Orthologues |
Cfa-Mir-149
Cja-Mir-149
Cpo-Mir-149
Dno-Mir-149
Eca-Mir-149
Ete-Mir-149
Hsa-Mir-149
Laf-Mir-149
Mml-Mir-149
Mmr-Mir-149
Mmu-Mir-149
Ocu-Mir-149
Pab-Mir-149
Rno-Mir-149
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037330.1: 119882813-119882874 [+]
UCSC
Ensembl
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| Seed |
CUGGCUC |
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Precursor
(pre-Mir +30nt flank) |
CCGCCCGGGGCCCCAGGCCGGCGCCCAGGCUCUGGCUCCGUGUCUUCACUCCCGUGUGUGUCCACCGAGGGAGGGAGGGACGGGGGCUGUGCUGGGGCGGCCGGGAGAGCGCGGGCGCCCGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CCGCCCGGGGCCCCAGG- -| A UCU - G A GUGUGUG
CCGG CGCCC GGC GGCUCC GU UCUUC CUCCC \
GGCC GCGGG UCG UCGGGG CA GGAGG GAGGG U
GGCCCGCGGGCGCGAGAG G^ G UG- G G - AGCCACC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-149_5p |
| mirBase accession | MIMAT0024570 |
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| Sequence |
0- UCUGGCUCCGUGUCUUCACUCCC -23
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-149-5p
|
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| Star sequence |
Bta-Mir-149_3p* |
| mirBase accession | MIMAT0024571 |
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| Sequence |
40- GAGGGAGGGACGGGGGCUGUGC -62
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-149-3p
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