| MirGeneDB ID | Cbr-Mir-4813 |
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| Family name |
MIR-4813 (all species) |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-4813
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| Paralogues |
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| Orthologues |
Cel-Mir-4813
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| Node of Origin (locus) |
Caenorhabditis
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| Node of Origin (family) |
Caenorhabditis
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Genome context
(CB4) |
III: 6986657-6986716 [+]
Ensembl
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| Seed |
GGCUUUC |
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Precursor
(pre-Mir +30nt flank) |
AUUCAGUCUCUAGUAUUCCCAGUGCUCACUAGGCUUUCCCGUUUUGUUGAACUAAUAGCAAAUUUAAGUUCAAUAUACAGGAUAGCCCCGUGAGUGGAAAGAAAGCAUAACUUUGUAUGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUCAGUCUCUAGUAUUC-----| AGU UA U C UU AAUAGC
CC GCUCAC GGCU UCC GU UGUUGAACU \
GG UGAGUG CCGA AGG CA AUAACUUGA A
UGUAUGUUUCAAUACGAAAGAAA^ --- CC U A U- AUUUAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Mature sequence |
Cbr-Mir-4813_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AGGCUUUCCCGUUUUGUUGAACU -23
Get sequence
|
|---|
| Co-mature sequence |
Cbr-Mir-4813_3p |
| mirBase accession | MIMAT0029916 |
|---|
| Sequence |
38- UUCAAUAUACAGGAUAGCCCCG -60
Get sequence
|
|---|
