MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-789

Family name MIR-789 (all species)
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-789
Paralogues
Orthologues Cel-Mir-789-P1  Cel-Mir-789-P2 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(CB4)		 V: 3561079-3561142 [+] Ensembl
Seed ACGUGGU
Precursor
(pre-Mir +30nt flank)		 
ACUAUUUCAACUUUUGCCCGACUUCGGAUUCACGUGGUCAUCCAGGCGGUGCACGUUAAAAGAUAUAAAUGCCCUGCCUGGGUCACCAUGUGAAUAGGGAAUACGGUCAGCUUAACUUGUUAAU
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Structure
        10         20         30        40        50        60 
ACUAUUUCAACUUUUGC-   AC-|  GG           C          U   CGUUAAA 
                  CCG   UUC  AUUCACGUGGU AUCCAGGCGG GCA       A
                  GGC   AGG  UAAGUGUACCA UGGGUCCGUC CGU       G
UAAUUGUUCAAUUCGACU   AUA^  GA           C          C   AAAUAUA 
  120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Mature sequence

Cbr-Mir-789_5p
mirBase accessionNone
Sequence 
0- CACGUGGUCAUCCAGGCGGUGCA -23
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Star sequence

Cbr-Mir-789_3p*
mirBase accessionMIMAT0004291
Sequence 
41- CCCUGCCUGGGUCACCAUGUGAA -64
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