| MirGeneDB ID | Cfa-Mir-3085 |
|---|
| Family name |
MIR-3085 (all species) |
|---|
| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-3085
Cja-Mir-3085
Cpo-Mir-3085
Dno-Mir-3085
Ete-Mir-3085
Hsa-Mir-3085
Laf-Mir-3085
Mml-Mir-3085
Mmr-Mir-3085
Mmu-Mir-3085
Ocu-Mir-3085
Pab-Mir-3085
Rno-Mir-3085
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(canFam3_add) |
chr28: 11089083-11089143 [-]
UCSC
Ensembl
|
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| Seed |
CUGGCUG |
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Precursor
(pre-Mir +30nt flank) |
AUCUACUCAGCUGCCAGCCCUGCUUUGGGGAGGUGCCAUUCUGAGGGCCAAGAGUUUGAUUAUGUGUCACUCUGGCUGCUAUGGCCCCCUCCCAGGGUCUGGGCCUCCCACCCUGACCGGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUCUACUCAGCUGCCAG- U-| GA U UCUGAG A UUGAUU
CCC GCUUUGGG GG GCCAU GGCCA GAGU \
GGG UGGGACCC CC CGGUA UCGGU CUCA A
UGGCCAGUCCCACCCUCC UC^ UC C UCG--- - CUGUGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| An |
An |
An |
Bl |
Ce |
Co |
He |
Hi |
Hi |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Star sequence |
Cfa-Mir-3085_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGUGCCAUUCUGAGGGCCAAGAGU -25
Get sequence
|
|---|
| Mature sequence |
Cfa-Mir-3085_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UCUGGCUGCUAUGGCCCCCUC -61
Get sequence
|
|---|
