MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-8908-P1d

Family name MIR-8908 (all species)
Species Dog (Canis familiaris)
MiRBase ID
Paralogues Cfa-Mir-8908-P1a1  Cfa-Mir-8908-P1a2  Cfa-Mir-8908-P1b  Cfa-Mir-8908-P1c  Cfa-Mir-8908-P2  Cfa-Mir-8908-P3  Cfa-Mir-8908-P4a1  Cfa-Mir-8908-P4a2  Cfa-Mir-8908-P4b  Cfa-Mir-8908-P4c  Cfa-Mir-8908-P5  Cfa-Mir-8908-P6  Cfa-Mir-8908-P7  Cfa-Mir-8908-P8 
Orthologues
Node of Origin (locus) C. familiaris
Node of Origin (family) C. familiaris
Genome context
(canFam3_add)		 chrUn_JH373668: 22740-22799 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-8908-P1d)		 Mir-8908-P7 chrUn_JH373668: 10366-10422 [+] UCSC Ensembl
Mir-8908-P8 chrUn_JH373668: 13007-13063 [+] UCSC Ensembl
Mir-8908-P1d chrUn_JH373668: 22740-22799 [+] UCSC Ensembl
Mir-8908-P4c chrUn_JH373668: 23687-23747 [+] UCSC Ensembl
Seed UUAGGAC
Precursor
(pre-Mir +30nt flank)		 
UCGUCUUACUGCAUAAUGUAUGCAGUGCUCUGCUGAGGAAGGUGCUAGUUGCAUUCAUUCAUAAGAGUAAUUAGGACCUCCCUGAGGGCAGUAAUGCUCACCUGAAGGACGUCUGUGGUG
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Structure
        10          20         30        40        50         
UCGUCUUACUGCAUAAU--  AU   G    -| G  G   A    G        AUUCAU 
                   GU  GCA UGCU CU CU AGG AGGU CUAGUUGC      U
                   CA  CGU AUGA GG GA UCC UCCA GAUUAAUG      C
GUGGUGUCUGCAGGAAGUC  CU   A    C^ -  G   C    G        AGAAUA 
.       110       100        90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-8908-P1d_5p*
mirBase accessionNone
Sequence 
0- UGCUGAGGAAGGUGCUAGUUGC -22
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Mature sequence

Cfa-Mir-8908-P1d_3p (predicted)
mirBase accessionNone
Sequence 
39- AUUAGGACCUCCCUGAGGGCA -60
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