MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-450-P1

Family name MIR-450 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-450-P2  Cja-Mir-450-P3 
Orthologues Bta-Mir-450-P1  Cfa-Mir-450-P1  Cpo-Mir-450-P1  Dno-Mir-450-P1  Eca-Mir-450-P1  Hsa-Mir-450-P1  Laf-Mir-450-P1  Mml-Mir-450-P1  Mmr-Mir-450-P1  Mmu-Mir-450-P1  Ocu-Mir-450-P1  Pab-Mir-450-P1  Rno-Mir-450-P1a  Rno-Mir-450-P1b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 126002435-126002491 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P1)		 Mir-450-P3 CM021937.1: 126002103-126002160 [-] UCSC Ensembl
Mir-450-P2 CM021937.1: 126002266-126002322 [-] UCSC Ensembl
Mir-450-P1 CM021937.1: 126002435-126002491 [-] UCSC Ensembl
Mir-542 CM021937.1: 126003574-126003632 [-] UCSC Ensembl
Mir-15-P2c CM021937.1: 126008473-126008535 [-] UCSC Ensembl
Mir-15-P1c CM021937.1: 126008803-126008861 [-] UCSC Ensembl
Seed UUUGCGA
Precursor
(pre-Mir +30nt flank)		 
AAAAGUGACCAAGGAAAGAUGCUGAACUAUUUUUGCGAAGUGUUCCUAAUAUGUAAUAUAAAUGUAUUGGGGACAUUUUGCAAUCAUAGUUUUGUAUCAAUAAUAUUGGAAAAAAAG
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Structure
        10          20        30        40        50        
AAAAGUGACCAAGGAAA--|    U       UU                    GUAAU 
                   GAUGC GAACUAU  UUGCGAAGUGUUCCUAAUAU     \
                   CUAUG UUUGAUA  AACGUUUUACAGGGGUUAUG     A
GAAAAAAAGGUUAUAAUAA^    U       CU                    UAAAU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Cja-Mir-450-P1_5p
mirBase accessionNone
Sequence 
0- UUUUGCGAAGUGUUCCUAAUAU -22
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Star sequence

Cja-Mir-450-P1_3p*
mirBase accessionNone
Sequence 
35- AUUGGGGACAUUUUGCAAUCAU -57
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