MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-616

Family name MIR-616 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-616  Mml-Mir-616  Pab-Mir-616 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021923.1: 58617746-58617808 [+] UCSC Ensembl
Seed CUCAAAA
Precursor
(pre-Mir +30nt flank)		 
GUGGUCAGUAAUUACCUUAGGUAAACCUCUGCUCAAAACCCUCCAGUGACUUCCAUGACAUGAAAUAGGAAUUCACUGGAGGAUUUUGAGCAGAGGAAUGACCUGUUUUAAAAGGCUCCUCCC
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Structure
        10         20         30        40        50        60 
GUGGUCAGUAAUUACCU-     AAA-|            C          C    AUGACA 
                  UAGGU    CCUCUGCUCAAAA CCUCCAGUGA UUCC      \
                  GUCCA    GGAGACGAGUUUU GGAGGUCACU AAGG      U
CCCUCCUCGGAAAAUUUU     GUAA^            A          U    AUAAAG 
 120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Cja-Mir-616_5p (predicted)
mirBase accessionNone
Sequence 
0- GCUCAAAACCCUCCAGUGACUUCC -24
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Star sequence

Cja-Mir-616_3p* (predicted)
mirBase accessionNone
Sequence 
39- AAUUCACUGGAGGAUUUUGAGCAG -63
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