| MirGeneDB ID | Pab-Mir-616 |
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| Family name |
MIR-616 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cja-Mir-616
Hsa-Mir-616
Mml-Mir-616
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| Node of Origin (locus) |
Simiiformes
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| Node of Origin (family) |
Simiiformes
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054689.2: 55446770-55446832 [-]
UCSC
Ensembl
|
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| Seed |
CUCAAAA |
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Precursor
(pre-Mir +30nt flank) |
UGGUCAGGAAUUACCUUAGGUAAUUCCUCCACUCAAAACCCUCCAGUGACUUCCAUGACAUGAAAUAGGAAGUCAUUGGAGGGUUUUGAGCAGAGGAAUGACCUGUUUUAAAAGGCUCACUCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGGUCAGGAAUUACCUU--| A CA AUGACA
AGGU AUUCCUC CUCAAAACCCUCCAGUGACUUCC \
UCCA UAAGGAG GAGUUUUGGGAGGUUACUGAAGG U
ACUCACUCGGAAAAUUUUG^ G AC AUAAAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Pab-Mir-616_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- ACUCAAAACCCUCCAGUGACUUCC -24
Get sequence
|
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| Star sequence |
Pab-Mir-616_3p* |
| mirBase accession | None |
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| Sequence |
39- AAGUCAUUGGAGGGUUUUGAGCAG -63
Get sequence
|
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