| MirGeneDB ID | Cmi-Mir-725 |
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| Family name |
MIR-725 (all species) |
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| Species |
Australian ghostshark (Callorhinchus milii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cpi-Mir-725
Dre-Mir-725
Gmo-Mir-725
Lch-Mir-725
Loc-Mir-725
Mal-Mir-725
Sto-Mir-725
Tni-Mir-725
Xla-Mir-725-P1
Xla-Mir-725-P2
Xtr-Mir-725
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Gnathostomata
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Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI636870.1: 14835-14892 [-]
UCSC
Ensembl
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| Seed |
UCAGUCA |
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Precursor
(pre-Mir +30nt flank) |
AUCACAGCCUUCAUGGUGGGUUGUUCACUGCACCUGAAACAGUGCCUGGGGAUAUUGUUGAGCAAUUUCAGUCAUUGUUUUGGGUGGAGUGCACCAAUCUUCACUCUACUGUAAUACA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUCACAGCCUUCAUGGU- UU-| G UG C GG AUAUUG
GGGUUG CACU CACC AAACAGUG CUG G U
UCUAAC GUGA GUGG UUUGUUAC GAC U U
ACAUAAUGUCAUCUCACU CAC^ G GU U UU AACGAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Bl |
Br |
Ey |
Gi |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Re |
Sk |
Sp |
Te |
Ut |
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| Star sequence |
Cmi-Mir-725_5p* |
| mirBase accession | None |
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| Sequence |
0- CACCUGAAACAGUGCCUGGGGA -22
Get sequence
|
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| Mature sequence |
Cmi-Mir-725_3p |
| mirBase accession | None |
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| Sequence |
36- UUCAGUCAUUGUUUUGGGUGGA -58
Get sequence
|
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