MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-671

Family name MIR-671 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-671
Paralogues
Orthologues Bta-Mir-671  Cfa-Mir-671  Cja-Mir-671  Dno-Mir-671  Eca-Mir-671  Ete-Mir-671  Hsa-Mir-671  Laf-Mir-671  Mml-Mir-671  Mmr-Mir-671  Mmu-Mir-671  Neu-Mir-671  Ocu-Mir-671  Pab-Mir-671  Rno-Mir-671  Sha-Mir-671 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(cavPor3)		 scaffold_32: 932637-932696 [+] UCSC
Seed CCGGUUC
Precursor
(pre-Mir +30nt flank)		 
UGGCUGGUGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUUCGGGCCGUAGAGCCAGGGUUGGUGC
Get precursor sequence
Structure
        10          20        30        40        50        60 
UGGCUGGUGAACUGGCA--|   A        A   A      GA           UGAUGG 
                   GGCC GGAAGAGG GGA GCCCUG  GGGGCUGGAGG      \
                   CCGG CUUUCUCC CCU CGGGAC  UCUUGGCCUCC      A
CGUGGUUGGGACCGAGAUG^   G        A   -      --           UUUUGU 
.       110       100        90         80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-671_5p*
mirBase accessionMIMAT0047369
Sequence 
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
Get sequence
Mature sequence

Cpo-Mir-671_3p
mirBase accessionMIMAT0047370
Sequence 
39- UCCGGUUCUCAGGGCUCCACC -60
Get sequence