| MirGeneDB ID | Ocu-Mir-671 |
| Family name |
MIR-671 (all species) |
| Species |
Rabbit (Oryctolagus cuniculus) |
| MiRBase ID |
ocu-mir-671
|
| Paralogues |
|
| Orthologues |
Bta-Mir-671
Cfa-Mir-671
Cja-Mir-671
Cpo-Mir-671
Dno-Mir-671
Eca-Mir-671
Ete-Mir-671
Hsa-Mir-671
Laf-Mir-671
Mml-Mir-671
Mmr-Mir-671
Mmu-Mir-671
Neu-Mir-671
Pab-Mir-671
Rno-Mir-671
Sha-Mir-671
|
| Node of Origin (locus) |
Theria
|
| Node of Origin (family) |
Theria
|
Genome context (oryCun2_add) |
chr13: 12646802-12646861 [+]
UCSC
Ensembl
|
| Seed |
CCGGUUC |
Precursor (pre-Mir +30nt flank) |
UGGCCAGUGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUCCGGGCCGUAGAGCCAGGGCUGGUGC
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
UGGCCAGUGAACUGGCA--| A A A GA UGAUGG
GGCC GGAAGAGG GGA GCCCUG GGGGCUGGAGG \
CCGG CCUUCUCC CCU CGGGAC UCUUGGCCUCC A
CGUGGUCGGGACCGAGAUG^ G A - -- UUUUGU
. 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | No |
Tissue expression
|
|
| Star sequence |
Ocu-Mir-671_5p* |
| mirBase accession | MIMAT0048555 |
| Sequence |
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
Get sequence
|
| Mature sequence |
Ocu-Mir-671_3p |
| mirBase accession | MIMAT0048556 |
| Sequence |
39- UCCGGUUCUCAGGGCUCCACC -60
Get sequence
|