| MirGeneDB ID | Cpo-Mir-6715 |
| Family name |
MIR-6715 (all species) |
| Species |
Guinea pig (Cavia porcellus) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-6715
Cfa-Mir-6715
Cja-Mir-6715
Eca-Mir-6715
Ete-Mir-6715
Hsa-Mir-6715
Laf-Mir-6715
Mml-Mir-6715
Mmr-Mir-6715
Mmu-Mir-6715
Ocu-Mir-6715
Pab-Mir-6715
Rno-Mir-6715
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (cavPor3) |
scaffold_11: 3327782-3327838 [-]
UCSC
|
| Seed |
CAAACCA |
Precursor (pre-Mir +30nt flank) |
UUCCGUGGUUGCCUGCACUGGGCUGUGUUCACAGGCACGGCCGGUUUGAGCAUUUUCACUGAAUUGCCAAACCAGGCGUGCCUGUGGCCACAACUCUCACCUGCGCCCGCCGAGUCU
Get precursor sequence
|
| Structure | 10 20 30 40 50
UUCCGUGGUUGCCUGCACU--| C UU G - A UUUUC
GGG UGUG CACAGGCACG CC GGUUUG GCA A
CUC ACAC GUGUCCGUGC GG CCAAAC CGU C
UCUGAGCCGCCCGCGUCCACU^ A CG - A - UAAGU
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
| Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
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| Star sequence |
Cpo-Mir-6715_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACAGGCACGGCCGGUUUGAGCA -22
Get sequence
|
| Mature sequence |
Cpo-Mir-6715_3p |
| mirBase accession | None |
| Sequence |
36- CCAAACCAGGCGUGCCUGUGG -57
Get sequence
|