| MirGeneDB ID | Laf-Mir-6715 |
| Family name |
MIR-6715 (all species) |
| Species |
African bush elephant (Loxodonta africana) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Bta-Mir-6715
Cfa-Mir-6715
Cja-Mir-6715
Cpo-Mir-6715
Eca-Mir-6715
Ete-Mir-6715
Hsa-Mir-6715
Mml-Mir-6715
Mmr-Mir-6715
Mmu-Mir-6715
Ocu-Mir-6715
Pab-Mir-6715
Rno-Mir-6715
|
| Node of Origin (locus) |
Eutheria
|
| Node of Origin (family) |
Eutheria
|
Genome context (GCA_000001905.1_Loxafr3.0) |
GL010037.1: 6782074-6782129 [-]
UCSC
Ensembl
|
| Seed |
CAGGCAC |
Precursor (pre-Mir +30nt flank) |
AUGGUUUGUGUCCACUCCUGGGCUGUGUCCACAGGCACAGCGGGUUCGAGCAUUUGACUGAAUUGCCAAACCAGUUGUUCCUGUAGCCACAGCCUUUACCUGCUCCUGAGUCCUCC
Get precursor sequence
|
| Structure | 10 20 30 40 50
AUGGUUUGUGUCCACUCCU--| UCC C G CGA UUUGA
GGGCUGUG ACAGG ACAGC GGUU GCA \
UCCGACAC UGUCC UGUUG CCAA CGU C
CCUCCUGAGUCCUCGUCCAUU^ CGA U A AC- UAAGU
110 100 90 80 70 60 |
| Deep sequencing |
|
| 3' NTU |
Unknown
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
| Mature sequence |
Laf-Mir-6715_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- ACAGGCACAGCGGGUUCGAGCA -22
Get sequence
|
| Co-mature sequence |
Laf-Mir-6715_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- CCAAACCAGUUGUUCCUGUAG -56
Get sequence
|