MirGeneDB 3.0
MirGeneDB ID

Csc-Novel-4-P1c

Family name CSC-NOVEL-4 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Novel-4-P1a  Csc-Novel-4-P1b 
Orthologues
Node of Origin (locus) C. sculpturatus
Node of Origin (family) C. sculpturatus
Genome context
(GCF_000671375.1_CSC)		 NW_019385009.1: 283970-284027 [+] Ensembl
Clustered miRNAs
(< 50kb from Novel-4-P1c)		 Novel-4-P1a NW_019385009.1: 259864-259921 [+] Ensembl
Novel-4-P1b NW_019385009.1: 274304-274361 [+] Ensembl
Novel-4-P1c NW_019385009.1: 283970-284027 [+] Ensembl
Seed CAUGUUG
Precursor
(pre-Mir +30nt flank)		 
ACAGUAUAUCUUCUUUCAUAACUCGUAAGGUCAUGUUGCCUCAUCAUUCUGUUACAAAACAAGACAGGAUGAUGGAGACAACGCGACCUUAAGAGUAUAAUAAAAUCUCCCGGUUCAC
Get precursor sequence
Structure
        10        20          30        40         50        
ACAGUAUAUCUUCUUUCAUA--    G       A     C  -|          UACAA 
                      ACUC UAAGGUC UGUUG CU CAUCAUUCUGU     \
                      UGAG AUUCCAG GCAAC GA GUAGUAGGACA     A
CACUUGGCCCUCUAAAAUAAUA    A       C     A  G^          GAACA 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Novel-4-P1c_5p
mirBase accessionNone
Sequence 
0- UCAUGUUGCCUCAUCAUUCUGU -22
Get sequence
Co-mature sequence

Csc-Novel-4-P1c_3p
mirBase accessionNone
Sequence 
35- AGGAUGAUGGAGACAACGCGACC -58
Get sequence