MirGeneDB 3.0
MirGeneDB ID

Dma-Mir-305

Family name MIR-305 (all species)
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues
Orthologues Aae-Mir-305  Aga-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P1  Cbr-Mir-305-P2  Cbr-Mir-305-P3  Cel-Mir-305-P1  Cel-Mir-305-P2  Csc-Mir-305  Dan-Mir-305  Dlo-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Gpa-Mir-305  Hme-Mir-305  Isc-Mir-305  Lpo-Mir-305-P4  Lpo-Mir-305-P5  Lpo-Mir-305-P6  Lpo-Mir-305-P7  Lpo-Mir-305-P8  Tca-Mir-305  Tur-Mir-305 
Node of Origin (locus) Cryptovermes
Node of Origin (family) Cryptovermes
Genome context
(DMA_ASM399081)		 NC_046180.1: 7554472-7554559 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-305)		 Mir-305 NC_046180.1: 7554472-7554559 [-] Ensembl
Mir-275 NC_046180.1: 7554925-7554989 [-] Ensembl
Seed UUGUACU
Precursor
(pre-Mir +30nt flank)		 
ACGCCUCGAAGAUAGAAGCACCUGUUGUUCAUUGUACUUCAUCAGGUGCUCUGGUCAAUCGUACGUAAACGUUUCCUUUGUGGAAAUCAUAUUCCCGGCACCUGCUGGAGUGCAAUUGAUGCGAAAGUGCAUUUGACAUCCAUCGACU
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Structure
        10         20         30         40        50        60        70    
ACGCCUCGAAGAUAGAA-    CUG    -  -|          U        CU  UCAAUCGUACGUAAACGUU 
                  GCAC   UUGU UC AUUGUACUUCA CAGGUGCU  GG                   \
                  CGUG   AGCG AG UAACGUGAGGU GUCCACGG  CC                   U
UCAGCUACCUACAGUUUA    AA-    U  U^          C        C-  UUAUACUAAAGGUGUUUCC 
      140       130        120       110       100         90        80
Deep sequencing
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CommentThere is a second Dicer cut -3 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Mature sequence

Dma-Mir-305_5p
mirBase accessionNone
Sequence 
0- AUUGUACUUCAUCAGGUGCUCUGG -24
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Star sequence

Dma-Mir-305_3p*
mirBase accessionNone
Sequence 
65- CGGCACCUGCUGGAGUGCAAUUG -88
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