MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-966

Family name MIR-966 (all species)
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-966
Paralogues
Orthologues Dsi-Mir-966  Dya-Mir-966 
Node of Origin (locus) D. melanogaster subgroup
Node of Origin (family) D. melanogaster subgroup
Genome context
(Drosophila_melanogaster_BDGP6)		 2L: 6045642-6045698 [-] UCSC Ensembl
Seed GUGGGUU
Precursor
(pre-Mir +30nt flank)		 
AUUUCGCUCGGCUGUAACCUGAUCCGCUGCUGUGGGUUGUGGGCUGUGUGGCUGUGGUAUAGGUGCCGCCAGUUGAUAACCCCCAGCGUGGGCACGGACCCACUGGUCGUCAACCGC
Get precursor sequence
Structure
        10            20        30        40        50        
AUUUCGCUCGGCUGUAA---  -| A     U    U       G     U     UGUGG 
                    CC UG UCCGC GCUG GGGUUGU GGCUG GUGGC     U
                    GG AC GGGUG CGAC CCCAAUA UUGAC CGCCG     A
CGCCAACUGCUGGUCACCCA  C^ -     -    C       G     -     UGGAU 
     110       100         90         80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-966_5p
mirBase accessionMIMAT0005481
Sequence 
0- UGUGGGUUGUGGGCUGUGUGGCU -23
Get sequence
Proposed targets microrna.org: MIMAT0005481
TargetScanFly: dme-miR-966
Star sequence

Dme-Mir-966_3p*
mirBase accessionMIMAT0020862
Sequence 
35- CCGCCAGUUGAUAACCCCCAGC -57
Get sequence