| MirGeneDB ID | Dya-Mir-966 |
| Family name |
MIR-966 (all species) |
| Species |
Fruit fly (Drosophila yakuba) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Dme-Mir-966
Dsi-Mir-966
|
| Node of Origin (locus) |
D. melanogaster subgroup
|
| Node of Origin (family) |
D. melanogaster subgroup
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 13146739-13146794 [+]
UCSC
Ensembl
|
| Seed |
GUGGGAU |
Precursor (pre-Mir +30nt flank) |
AUUCCGCUCGGCUGUAACCUGAUCCGCUGCUGUGGGAUGUGGGAUGUGGGCUGUGGUAUAGGUGCCGCCAGUUGAUAACCCCCAGCGUGGGCACGGCCCCACUGGUCGUCAACCGC
Get precursor sequence
|
| Structure | 10 20 30 40 50
AUUCCGCUCGGCUGUAA--- -| A U U A G A UG UGUGG
CC UG UCCGC GCUG GGG UGU GG UG GGC U
GG AC GGGUG CGAC CCC AUA UU AC CCG A
CGCCAACUGCUGGUCACCCC C^ - - C A G G CG UGGAU
110 100 90 80 70 60 |
| Deep sequencing |
|
| 3' NTU |
Unknown
|
| Motifs | UGUG in loop |
Tissue expression
|
|
| Mature sequence |
Dya-Mir-966_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUGGGAUGUGGGAUGUGGGCU -22
Get sequence
|
| Star sequence |
Dya-Mir-966_3p* (predicted) |
| mirBase accession | None |
| Sequence |
34- CCGCCAGUUGAUAACCCCCAGC -56
Get sequence
|