| MirGeneDB ID | Dre-Mir-726 |
|---|
| Family name |
MIR-726 (all species) |
|---|
| Species |
Zebrafish (Danio rerio) |
|---|
| MiRBase ID |
dre-mir-726
|
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| Paralogues |
|
|---|
| Orthologues |
Aca-Mir-726
Cpi-Mir-726
Gga-Mir-726
Gja-Mir-726
Loc-Mir-726
Mal-Mir-726
Spt-Mir-726
Tgu-Mir-726
Tni-Mir-726
Xla-Mir-726-P1
Xla-Mir-726-P2
Xtr-Mir-726
|
|---|
| Node of Origin (locus) |
Osteichthyes
|
|---|
| Node of Origin (family) |
Osteichthyes
|
|---|
Genome context
(danRer11) |
chr11: 25476111-25476171 [-]
UCSC
Ensembl
|
|---|
| Seed |
UCACUAC |
|---|
Precursor
(pre-Mir +30nt flank) |
AAGUGUCAACACUCAGUCAGUCGUAUGCCUGGAAUUCCGCUAGUUCUGAACUAUUCGUGAUUGGCAAAAGUUCACUACUAGCAGAACUCGGAUAUACAACUGAAUUCUCAACGACAGCUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAGUGUCAACACUCAGU--| C C AA C UC AUUCGUG
CAGU GUAUG CUGG UUC GCUAGU UGAACU A
GUCA CAUAU GGCU AAG CGAUCA ACUUGA U
ACUCGACAGCAACUCUUAA^ A A C- A UC AAACGGU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Star sequence |
Dre-Mir-726_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GGAAUUCCGCUAGUUCUGAACU -22
Get sequence
|
|---|
| Mature sequence |
Dre-Mir-726_3p |
| mirBase accession | MIMAT0003754 |
|---|
| Sequence |
40- UUCACUACUAGCAGAACUCGG -61
Get sequence
|
|---|
| Proposed targets |
TargetScanFish: dre-miR-726
|
|---|
