| MirGeneDB ID | Spt-Mir-726 |
|---|---|
| Family name | MIR-726 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-726 Cpi-Mir-726 Dre-Mir-726 Gga-Mir-726 Gja-Mir-726 Loc-Mir-726 Mal-Mir-726 Tgu-Mir-726 Tni-Mir-726 Xla-Mir-726-P1 Xla-Mir-726-P2 Xtr-Mir-726 |
| Node of Origin (locus) | Osteichthyes |
| Node of Origin (family) | Osteichthyes |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01006279.1: 162176-162236 [-] UCSC Ensembl |
| Seed | UCACUAC |
| Precursor (pre-Mir +30nt flank) |
CUUGCUCCCCAGUCUCCCGGGCUCUCGUCAGGAAUUCCGCUAGUUCUGAACUGGUCACCCUUGCGAGAAGUUCACUACUAGCAGAACUCGGCCGUGCGCCCCACACUCCUCGGGGGGGCAAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CUUGCUCCCCAGUCUCCC-- UCU -| AG A C UC GGUCACC GGGC C GUC GA UUC GCUAGU UGAACU C CCCG G CGG CU AAG CGAUCA ACUUGA U AACGGGGGGGCUCCUCACAC CGU C^ -- C A UC AGAGCGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Spt-Mir-726_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GGAAUUCCGCUAGUUCUGAACU -22
Get sequence
|
| Mature sequence | Spt-Mir-726_3p (predicted) |
| mirBase accession | None |
| Sequence |
40- UUCACUACUAGCAGAACUCGG -61
Get sequence
|
