| MirGeneDB ID | Dre-Mir-734 |
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| Family name |
MIR-734 (all species) |
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| Species |
Zebrafish (Danio rerio) |
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| MiRBase ID |
dre-mir-734
|
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| Paralogues |
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| Orthologues |
Gmo-Mir-734
Loc-Mir-734
Mal-Mir-734
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| Node of Origin (locus) |
Neopterygii
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| Node of Origin (family) |
Neopterygii
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Genome context
(danRer11) |
chr1: 34122894-34122960 [+]
UCSC
Ensembl
|
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| Seed |
AAAUGCU |
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Precursor
(pre-Mir +30nt flank) |
CCUGCUUUGCAUCCUUUGAUAUUGAGAGCUGAACCAUUCUGCAGCAUGGCUGCCUGUGGAUCCUCUGGGGAAAGGUAAAUGCUGCAGAAUCGUACCGUUCUUGGUAUCACUGGUCUUCACUUCACUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCUGCUUUGCAUCCUUU-- UG UGA C G-| GCCUGUGGAU
GAUAU AGAGC AC AUUCUGCAGCAU GCU C
CUAUG UCUUG UG UAAGACGUCGUA UGG C
GUCACUUCACUUCUGGUCA GU CCA C AA^ AAAGGGGUCU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Star sequence |
Dre-Mir-734_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GAACCAUUCUGCAGCAUGGCUG -22
Get sequence
|
|---|
| Mature sequence |
Dre-Mir-734_3p |
| mirBase accession | MIMAT0003765 |
|---|
| Sequence |
45- UAAAUGCUGCAGAAUCGUACCG -67
Get sequence
|
|---|
| Proposed targets |
TargetScanFish: dre-miR-734
|
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