MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-130-P1f

Family name MIR-130 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-130-P1e  Ebu-Mir-130-P1g  Ebu-Mir-130-P2e  Ebu-Mir-130-P4e 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02007498.1: 490585-490639 [-] UCSC Ensembl
Seed AGUGCAA
Precursor
(pre-Mir +30nt flank)		 
AUGACACCUUUAUGUCUACAGCUCCCUGCUGUCCUUUUAAUGUUGCACUGCUGCCUCCUGAAUCAGUGCAAUGUGAAAAGGGCAUCGGUGUGUUGGUAUUGCUGCCAAUUCAUUC
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Structure
        10          20        30        40        50       
AUGACACCUUUAUGUCUA--|   UCC   C         A           CUGCCU 
                    CAGC   CUG UGUCCUUUU AUGUUGCACUG      \
                    GUUG   GGC ACGGGAAAA UGUAACGUGAC      C
CUUACUUAACCGUCGUUAUG^   UGU   U         G           UAAGUC 
   110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ebu-Mir-130-P1f_5p*
mirBase accessionNone
Sequence 
0- GUCCUUUUAAUGUUGCACUGCU -22
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Mature sequence

Ebu-Mir-130-P1f_3p
mirBase accessionNone
Sequence 
33- CAGUGCAAUGUGAAAAGGGCAU -55
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