MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-12464

Family name MIR-12464 (all species)
Species Horse (Equus caballus)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-12464 
Node of Origin (locus) Scrotifera
Node of Origin (family) Scrotifera
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009148.1: 130554735-130554793 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-12464)		 Mir-190-P1 CM009148.1: 130513699-130513756 [-] UCSC Ensembl
Mir-12464 CM009148.1: 130554735-130554793 [-] UCSC Ensembl
Seed CGAUGAU
Precursor
(pre-Mir +30nt flank)		 
AAUAUCAUUCAGCAACCAAUGGUGACAGUAACGAUGAUGAUGGUGGUGAAGAUGGGUUGCCUUUUUCUUCAUCAUAAUCAUCAUUGACAUUAUCAUCAUUAUUAACAUCAUCAUCUUCA
Get precursor sequence
Structure
        10          20        30        40        50         
AAUAUCAUUCAGCAACC--|       C   AA          G          UGGGUU 
                   AAUGGUGA AGU  CGAUGAUGAU GUGGUGAAGA      \
                   UUACUACU UUA  GUUACUACUA UACUACUUCU      G
ACUUCUACUACUACAAUUA^       A   CA          A          UUUUCC 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-12464_5p
mirBase accessionNone
Sequence 
0- ACGAUGAUGAUGGUGGUGAAGA -22
Get sequence
Star sequence

Eca-Mir-12464_3p*
mirBase accessionNone
Sequence 
37- UUCAUCAUAAUCAUCAUUGACA -59
Get sequence