MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-615

Family name MIR-615 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-615
Paralogues
Orthologues Bta-Mir-615  Cfa-Mir-615  Cja-Mir-615  Cpo-Mir-615  Ete-Mir-615  Hsa-Mir-615  Laf-Mir-615  Mml-Mir-615  Mmr-Mir-615  Mmu-Mir-615  Ocu-Mir-615  Pab-Mir-615  Rno-Mir-615 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009153.1: 71801156-71801219 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-615)		 Mir-196-P4 CM009153.1: 71759182-71759240 [+] UCSC Ensembl
Mir-615 CM009153.1: 71801156-71801219 [+] UCSC Ensembl
Seed CCGAGCC
Precursor
(pre-Mir +30nt flank)		 
AGGAUUCCAGCGACGCGGGAGGGGCGGGAGGGGGGUCCCCGGUGCUCGGAUCUCGAGGGUGCUUAUUGUUCGGUCCGAGCCUGGGUCUCCCUCUCCCCCCCUCCUCAGCCCCUCCGGCUGCUGA
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Structure
        10           20        30        40        50        60  
AGGAUUCCAGCGACGCG---|      C          UC     U         UCGAGGGUG 
                    GGAGGGG GGGAGGGGGG  CCCGG GCUCGGAUC         \
                    CCUCCCC CCCUCUCCCU  GGGUC CGAGCCUGG         C
AGUCGUCGGCCUCCCCGACU^      -          CU     -         CUUGUUAUU 
  120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-615_5p* (predicted)
mirBase accessionMIMAT0012976
Sequence 
0- GGGGGUCCCCGGUGCUCGGAUC -22
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Mature sequence

Eca-Mir-615_3p
mirBase accessionMIMAT0012977
Sequence 
43- UCCGAGCCUGGGUCUCCCUCU -64
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