| MirGeneDB ID | Eca-Mir-6529 |
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| Family name |
MIR-6529 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-6529
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| Paralogues |
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| Orthologues |
Bta-Mir-6529
Cfa-Mir-6529
Cja-Mir-6529
Cpo-Mir-6529
Dno-Mir-6529
Ete-Mir-6529
Hsa-Mir-6529
Laf-Mir-6529
Mml-Mir-6529
Mmr-Mir-6529
Ocu-Mir-6529
Pab-Mir-6529
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009166.1: 41398427-41398487 [+]
UCSC
Ensembl
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| Seed |
AGAGAUC |
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Precursor
(pre-Mir +30nt flank) |
AACAUCUCAGAUGAGACAACCUGUUCUCUUGAGAGAUCAGAGGCGCAGAGUGCGUCAAUGUCAGUGAAGCCUGUGCCUUUUACCUCUUUAAGAGCGCACGGUUUCAUUCUGCUCCUAAACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AACAUCUCAGAUGAGAC- - U -| AUC A GCGUCAAU
AACC UGU CUCUU GAGAG AGAGGCGCAG GU \
UUGG ACG GAGAA UUCUC UUUCCGUGUC CG G
UCAAAUCCUCGUCUUACU C C U^ CAU - AAGUGACU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-6529_5p |
| mirBase accession | None |
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| Sequence |
0- GAGAGAUCAGAGGCGCAGAGU -21
Get sequence
|
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| Star sequence |
Eca-Mir-6529_3p* |
| mirBase accession | MIMAT0034760 |
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| Sequence |
39- CCUGUGCCUUUUACCUCUUUAA -61
Get sequence
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