MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-1999-P1

Family name MIR-1999 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-1999-P2 
Orthologues Cte-Mir-1999  Dgr-Mir-1999  Pdu-Mir-1999 
Node of Origin (locus) E. fetida
Node of Origin (family) Pleistoannelida
Genome context
(Efe_combined)		 Efet.01.157941: 683-742 [+]
Seed GUAGCCA
Precursor
(pre-Mir +30nt flank)		 
UGAGGUAUACAGACUACAAAGGACGUGGAGAGACUCCAACCCCGGUUACACAUGUGUAAUAAUAUGGGUGUAGCCAGAGCUUGGGCCUGCUUCCUUCCUUGGUCACCAGCUGUCGCCACC
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Structure
        10          20        30         40         50         
UGAGGUAUACAGACUACA--|    CGU    -  A U    CCCC-        AUGUGUA 
                    AAGGA   GGAG AG C CCAA     GGUUACAC       A
                    UUCCU   CUUC UC G GGUU     CCGAUGUG       U
CCACCGCUGUCGACCACUGG^    UC-    G  C -    CGAGA        GGUAUAA 
.       110       100         90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Star sequence

Efe-Mir-1999-P1_5p*
mirBase accessionNone
Sequence 
0- AGACUCCAACCCCGGUUACACA -22
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Mature sequence

Efe-Mir-1999-P1_3p
mirBase accessionNone
Sequence 
38- UGUAGCCAGAGCUUGGGCCUGC -60
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