MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-87-o18

Family name MIR-87 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-87-o12  Efe-Mir-87-o13  Efe-Mir-87-o14  Efe-Mir-87-o15  Efe-Mir-87-o16  Efe-Mir-87-o17 
Orthologues Gsp-Mir-87  Sne-Mir-87 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 Efet.01.588090: 349-410 [-]
Seed CGCCUGA
Precursor
(pre-Mir +30nt flank)		 
UUUGGCUCUGUUGCUAUUCGGGCAAUCGGUCCGCCUGAUAUUUUGACUCAUGCCUCUAUUGUCGACACGGGUGAGCAAACUCUCAGGUGCGCCGAGGGCUUGAUGCAUGCGCUCCUCUUCCU
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Structure
        10          20        30        40        50        60 
UUUGGCUCUGUUGCUAU--|     AA     C       UAU    A     G  UCUAUU 
                   UCGGGC  UCGGU CGCCUGA   UUUG CUCAU CC      G
                   AGUUCG  AGCCG GUGGACU   AAAC GAGUG GG      U
UCCUUCUCCUCGCGUACGU^     GG     C       CUC    -     -  CACAGC 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Efe-Mir-87-o18_5p
mirBase accessionNone
Sequence 
0- CCGCCUGAUAUUUUGACUCAUGCCU -25
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Co-mature sequence

Efe-Mir-87-o18_3p
mirBase accessionNone
Sequence 
40- GUGAGCAAACUCUCAGGUGCGC -62
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