| MirGeneDB ID | Esc-Mir-12528 |
|---|
| Family name |
MIR-12528 (all species) |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Obi-Mir-12528
Ovu-Mir-12528
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044494.1: 25941751-25941815 [-]
Ensembl
|
|---|
| Seed |
ACGUGUC |
|---|
Precursor
(pre-Mir +30nt flank) |
UCUUCCUACUGUAUCAAAAGUAGUCCGGCUUACGUGUCACCUACAGCCAUGCUUGUCAGCUAUUGGAUACAGCAUGGCAUAUGUGACCCGCUUAGUCGAGGCGUACAGUGUUCGACAGCUACUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UCUUCCUACUGUAUCAAAA - - UA-| U C CA UGUCAGCU
GUA GUC CGGCU CG GUCAC UA GCCAUGCU \
CAU CGG GCUGA GC CAGUG AU CGGUACGA A
AAUCAUCGACAGCUUGUGA G A UUC^ C U A- CAUAGGUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Esc-Mir-12528_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UACGUGUCACCUACAGCCAUGCU -23
Get sequence
|
|---|
| Star sequence |
Esc-Mir-12528_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
42- CAUGGCAUAUGUGACCCGCUUAG -65
Get sequence
|
|---|
