| MirGeneDB ID | Obi-Mir-12528 |
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| Family name |
MIR-12528 (all species) |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Mir-12528
Ovu-Mir-12528
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(PRJNA270931_OBI) |
KQ417215: 215788-215852 [+]
Ensembl
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| Seed |
ACGUGUC |
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Precursor
(pre-Mir +30nt flank) |
UUAUGGACCAUUCGCUACUGCUGUUCGGCUUACGUGUCACCUACAGCCAUGCUGGUCAGGUGUCUAAGACAGCAUGGCAUAUGUGACUCGAAAAGUCGUGUGAGUCAGAAAUCAGCAAAAGAAUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UUAUGGACCAUUCGCUACU- GUU- A-| U C CA UGGUCAGGU
GCU CGGCUU CG GUCAC UA GCCAUGC \
UGA GCUGAA GC CAGUG AU CGGUACG G
AUAAGAAAACGACUAAAGAC GUGU AA^ U U A- ACAGAAUCU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Obi-Mir-12528_5p |
| mirBase accession | None |
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| Sequence |
0- UACGUGUCACCUACAGCCAUGC -22
Get sequence
|
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| Star sequence |
Obi-Mir-12528_3p* |
| mirBase accession | None |
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| Sequence |
43- AUGGCAUAUGUGACUCGAAAAG -65
Get sequence
|
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