| MirGeneDB ID | Gpa-Mir-2-P9 |
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| Family name |
MIR-2 (all species) |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
Gpa-Mir-2-P1-v1
Gpa-Mir-2-P2a
Gpa-Mir-2-P2b
Gpa-Mir-2-P3a
Gpa-Mir-2-P3b
Gpa-Mir-2-P4a-v1
Gpa-Mir-2-P4b-v1
Gpa-Mir-2-P5-v1
Gpa-Mir-2-P6
Gpa-Mir-2-P7
Gpa-Mir-2-P8
|
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| Orthologues |
Asu-Mir-2-o9
Dan-Mir-2-P9
Dme-Mir-2-P9-v1
Dmo-Mir-2-P9
Dsi-Mir-2-P9-v1
Dya-Mir-2-P9-v1
Gsp-Mir-2
Ple-Mir-2
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| Node of Origin (locus) |
Glossinidae + Drosophilidae
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| Node of Origin (family) |
Protostomia
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Genome context
(GpalI1) |
Scaffold132: 422743-422809 [+]
Ensembl
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| Seed |
UAAGGAA |
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Precursor
(pre-Mir +30nt flank) |
AAUAAAAUAAAUAAAAUUAUAUCGAGUUAUCUAAGGAAAUAGUAGCCGUGAUUUUAUUUAACAACUUACACCAUCACAGUUGCUGUUUCUUUUAGAUAACUCGUUCUUUUAAAAACAUCUUUAAAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AAUAAAAUAAAUAAAAUUAUAU-- -| C UUUAUUUAA
CGAGUUAUCU AAGGAAAUAGUAGC GUGAU C
GCUCAAUAGA UUUCUUUGUCGUUG CACUA A
AAAAAUUUCUACAAAAAUUUUCUU U^ A CCACAUUCA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Gpa-Mir-2-P9_5p |
| mirBase accession | None |
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| Sequence |
0- CUAAGGAAAUAGUAGCCGUGAU -22
Get sequence
|
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| Star sequence |
Gpa-Mir-2-P9_3p* |
| mirBase accession | None |
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| Sequence |
44- CACAGUUGCUGUUUCUUUUAGAU -67
Get sequence
|
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