| MirGeneDB ID | Gpa-Mir-282 |
|---|
| Family name |
MIR-282 (all species) |
|---|
| Species |
Tsetse fly (Glossina pallidipes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-282-P1
Aae-Mir-282-P2
Aga-Mir-282
Bge-Mir-282
Dan-Mir-282
Dma-Mir-282-v1
Dme-Mir-282
Dmo-Mir-282
Dpu-Mir-282
Dsi-Mir-282
Dya-Mir-282
Hme-Mir-282
Tca-Mir-282
|
|---|
| Node of Origin (locus) |
Pancrustacea
|
|---|
| Node of Origin (family) |
Pancrustacea
|
|---|
Genome context
(GpalI1) |
Scaffold8: 2954604-2954683 [-]
Ensembl
|
|---|
| Seed |
AGCCUCU |
|---|
Precursor
(pre-Mir +30nt flank) |
GAUUGUUUUUGCAACUCCUUACUCUAAGUCUAGCCUCUACUAGGCUUUGUCUGUGUCCACAUGCGAUGUGGAGUUAUUAAAUGUUCAGACAUAGCCUAAAAGAGGUUAGGUGAAGCAGGAAGUAAAUCGACUUAUCAUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAUUGUUUUUGCAACUC- A -| AA AC U GUGUCCACAUGCGAUG
CUU CU CU GUCUAGCCUCU UAGGCU UGUCU U
GAA GA GA UGGAUUGGAGA AUCCGA ACAGA G
AAUACUAUUCAGCUAAAU G C^ AG AA U CUUGUAAAUUAUUGAG
. 130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
| To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Gpa-Mir-282_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAGCCUCUACUAGGCUUUGUCU -22
Get sequence
|
|---|
| Star sequence |
Gpa-Mir-282_3p* |
| mirBase accession | None |
|---|
| Sequence |
58- ACAUAGCCUAAAAGAGGUUAGG -80
Get sequence
|
|---|
