MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-29-P2h

Family name MIR-29 (all species)
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-29-P1  Gpa-Mir-29-P2g 
Orthologues Aae-Mir-29-P2h  Aga-Mir-29-P2h  Agr-Mir-29-P2  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bge-Mir-29-P2h  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cte-Mir-29-P2  Dan-Mir-29-P2h  Dgr-Mir-29-P2  Dma-Mir-29-P2  Dme-Mir-29-P2h  Dmo-Mir-29-P2h  Dpu-Mir-29-P2  Dsi-Mir-29-P2h  Dya-Mir-29-P2h  Eba-Mir-29-P2  Esc-Mir-29-P2  Gsp-Mir-29  Hme-Mir-29-P2h  Hru-Mir-29-P2  Lgi-Mir-29-P2  Lhy-Mir-29-P2  Llo-Mir-29-P2  Mgi-Mir-29-P2  Mom-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ofu-Mir-29-P2  Ovu-Mir-29-P2  Pau-Mir-29-P2  Pcr-Mir-29-P2  Pdu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Pve-Mir-29-P2  Rph-Mir-29-P2  Sko-Mir-29-P2  Sme-Mir-29-o2  Spu-Mir-29-P2  Tca-Mir-29-P2h  War-Mir-29-P2  Xbo-Mir-29-P2 
Node of Origin (locus) Neoptera
Node of Origin (family) Bilateria
Genome context
(GpalI1)		 Scaffold391: 34785-34867 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-29-P2h)		 Mir-29-P2h Scaffold391: 34785-34867 [-] Ensembl
Mir-2-P7 Scaffold391: 37678-37806 [-] Ensembl
Seed AGCACCA
Precursor
(pre-Mir +30nt flank)		 
AGAAAAACUUUAAAAAUAAUUCAUUUUAGAACUGAAUUCUCGUGGGUCUGCAUAGCAUACCAUAUAUCGUGUGUACAGUAAUUGAAAAUUUGUAGCACCAUGAGAUUCAGCUCUGGCAUGAAUUUCAAUGCACACCACCACCA
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Structure
        10          20        30        40        50        60        70 
AGAAAAACUUUAAAAAU--|      U     A      U       GU     UAGCAUACCAUAUAUCGU 
                   AAUUCAU UUAGA CUGAAU CUCGUGG  CUGCA                  G
                   UUAAGUA GGUCU GACUUA GAGUACC  GAUGU                  U
ACCACCACCACACGUAACU^      C     C      -       AC     UUAAAAGUUAAUGACAUG 
 140       130       120       110        100        90        80
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
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Star sequence

Gpa-Mir-29-P2h_5p*
mirBase accessionNone
Sequence 
0- ACUGAAUUCUCGUGGGUCUGCA -22
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Mature sequence

Gpa-Mir-29-P2h_3p
mirBase accessionNone
Sequence 
62- UAGCACCAUGAGAUUCAGCUC -83
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