MirGeneDB 3.0
MirGeneDB ID

Hme-Novel-3

Family name HME-NOVEL-3 (all species)
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) H. melpomene
Node of Origin (family) H. melpomene
Genome context
(Hmel_1)		 HE671335: 621504-621559 [-] Ensembl
Clustered miRNAs
(< 50kb from Novel-3)		 Novel-2 HE671335: 621364-621419 [+] Ensembl
Novel-3 HE671335: 621504-621559 [-] Ensembl
Seed GCGGAGA
Precursor
(pre-Mir +30nt flank)		 
UUCUAAAAAGAAGGUAUUGAAAAUGUAUGAAAUUGCUCGGUUUCUCCGCUUUAGUCAUAACUACAGCGGAGAAACUGAGCAAUUCCACAAGCCCGAAUUCACUUCAUGCACCUUGC
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Structure
        10        20          30        40        50       
UUCUAAAAAGAAGGUAUUGAAAAUGUA--| A                    UUAGUC 
                             UG AAUUGCUCGGUUUCUCCGCU      A
                             AC UUAACGAGUCAAAGAGGCGA      U
CGUUCCACGUACUUCACUUAAGCCCGAAC^ C                    CAUCAA 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Novel-3_5p*
mirBase accessionNone
Sequence 
0- AAUUGCUCGGUUUCUCCGCUUU -22
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Mature sequence

Hme-Novel-3_3p
mirBase accessionNone
Sequence 
34- AGCGGAGAAACUGAGCAAUUCC -56
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