| MirGeneDB ID | Lch-Mir-7147 |
|---|---|
| Family name | MIR-7147 (all species) |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cpi-Mir-7147 Dre-Mir-7147 Loc-Mir-7147 Mal-Mir-7147 Tni-Mir-7147 Xla-Mir-7147-P1 Xla-Mir-7147-P2 Xtr-Mir-7147 |
| Node of Origin (locus) | Osteichthyes |
| Node of Origin (family) | Osteichthyes |
| Genome context (LatCha1_add) |
JH129753.1: 40116-40175 [-] Ensembl |
| Seed | GUACCAU |
| Precursor (pre-Mir +30nt flank) |
AUGCUCUCCAACCAUCGGAGCUGCCAGUGAUGUACCAUGCUGGUAGCCAGUGUUAAAACAAGGCCUUGCUGGCAAUCAGUGUUGUGCCACACUGGCUUCUCAGUCUGAAAGUCAGCCGGUGet precursor sequence |
| Structure | 10 20 30 40 50 AUGCUCUCCAACCAUCG--| CU AU C A UUAAAA GAG GCCAGUG GUAC AUGCUGGU GCCAGUG C CUC CGGUCAC CGUG UGUGACUA CGGUCGU A UGGCCGACUGAAAGUCUGA^ UU AC U A UCCGGA . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Lch-Mir-7147_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUACCAUGCUGGUAGCCAGUG -22
Get sequence
|
| Star sequence | Lch-Mir-7147_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- CUGGCAAUCAGUGUUGUGCCAC -60
Get sequence
|
