MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-276-P9

Family name MIR-276 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-276-P3  Lpo-Mir-276-P4  Lpo-Mir-276-P5  Lpo-Mir-276-P6  Lpo-Mir-276-P7  Lpo-Mir-276-P8 
Orthologues Bge-Mir-276  Dlo-Mir-276  Dma-Mir-276  Dpu-Mir-276  Hme-Mir-276  Isc-Mir-276  Tca-Mir-276  Tur-Mir-276 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Arthropoda
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013667836.1: 99097-99154 [-] Ensembl
Seed AGGAACU
Precursor
(pre-Mir +30nt flank)		 
GGAGGUACAGAAGAUCGGUUGGUUACCGAGAGCGAGGUAUGGAGUCCUUACUGUGAUCACAGAAGGUAGGAACUUCUUACCAUGCUCGCGAUAAUUACUAACCUUACAACGUUACUGC
Get precursor sequence
Structure
        10          20        30        40        50        
GGAGGUACAGAAGAUCGGU--|     C  A     A    U     C      GUGAU 
                     UGGUUA CG GAGCG GGUA GGAGU CUUACU     C
                     AUUAAU GC CUCGU CCAU CUUCA GGAUGG     A
CGUCAUUGCAACAUUCCAAUC^     A  G     A    U     A      AAGAC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-276-P9_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGCGAGGUAUGGAGUCCUUACU -22
Get sequence
Mature sequence

Lpo-Mir-276-P9_3p
mirBase accessionNone
Sequence 
36- UAGGAACUUCUUACCAUGCUCG -58
Get sequence