MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-1549

Family name MIR-1549 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-1549b
Paralogues
Orthologues Sha-Mir-1549 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)		 Un: 60423751-60423809 [+] UCSC Ensembl
Seed UCCGCCC
Precursor
(pre-Mir +30nt flank)		 
AGAAUAAGGACGCGUGUUUGUUCGUAACUCGCCGGGCUCGUAGGUAGAAGCUGAGUUUUGUUUUGCUUCCGCCCUGCAAGCCCGGUAGCUGGGAACAAAUUUCGCUUAGCUCCGACUGU
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Structure
        10            20        30        40         50        
AGAAUAAGGACGCGUGU----|     G  A  C        C    - UA     UGAGUU 
                     UUGUUC UA CU GCCGGGCU GUAG G  GAAGC      \
                     AACAAG GU GA UGGCCCGA CGUC C  CUUCG      U
UGUCAGCCUCGAUUCGCUUUA^     G  C  -        A    C GC     UUUUGU 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Br Ce He Ki Te
Star sequence

Mdo-Mir-1549_5p*
mirBase accessionMIMAT0050368
Sequence 
0- GCCGGGCUCGUAGGUAGAAGC -21
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Mature sequence

Mdo-Mir-1549_3p
mirBase accessionMIMAT0050369
Sequence 
36- UUCCGCCCUGCAAGCCCGGUAGC -59
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