| MirGeneDB ID | Mml-Mir-1180 |
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| Family name |
MIR-1180 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-1180
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| Paralogues |
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| Orthologues |
Cja-Mir-1180
Eca-Mir-1180
Hsa-Mir-1180
Mmr-Mir-1180
Pab-Mir-1180
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| Node of Origin (locus) |
Boreoeutheria
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| Node of Origin (family) |
Boreoeutheria
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014351.1: 18832375-18832430 [-]
UCSC
Ensembl
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| Seed |
UUCCGGC |
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Precursor
(pre-Mir +30nt flank) |
AGUCCCGGCGGGGCGAAGCCCGCGGCUGCCGGACCCACCCGGCCGGGAAUAGUGCUCCUGGUUGUUUCCGGCUCGCGUGGGUGUGUCGGCGGCGGGGCCUGACACCCCCGGCCUCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGUCCCGGCGGGGCGAAG-- G C G C -| GUGCU
CCCGC GCUG CG ACCCAC CG GCCGGGAAUA \
GGGCG CGGC GU UGGGUG GC CGGCCUUUGU C
CCUCCGGCCCCCACAGUCCG G U G C U^ UGGUC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-1180_5p* |
| mirBase accession | MIMAT0028264 |
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| Sequence |
0- GGACCCACCCGGCCGGGAAUA -21
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-1180-5p
|
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| Mature sequence |
Mml-Mir-1180_3p |
| mirBase accession | MIMAT0028265 |
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| Sequence |
34- UUUCCGGCUCGCGUGGGUGUGU -56
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-1180-3p
|
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